Guille

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  • in reply to: GMOS IFU data reduction scripts (updated Oct 2016) #959
    Guille
    Guille
    Participant

    Hi James

    You did point me in the right direction. Found that S20110906S0205, 206, 207 only show one “section” in the raw data. fxheader yields:

    0 S20110906S0205.fits 16 Bias
    1 IMAGE -1 2080×4608 16 F

    0 S20110906S0206.fits 16 Bias
    1 IMAGE -1 2080×4608 16 F

    0 S20110906S0207.fits 16 Bias
    1 IMAGE -1 2080×4608 16 F

    I cannot check right now the GSA as it is giving some weird reply messages. In the meantime, deleting these 3 files avoided this problem

    GEMCOMBINE — Finished: Sat Aug 15 14:42:31 ART 2015

    GEMCOMBINE — Exit status: GOOD
    ——————————————————————————–

    GBIAS: Exit status: GOOD.
    —————————————————————————-

    🙂

    Cheers,

    Guillermo

    in reply to: GMOS IFU data reduction scripts (updated Oct 2016) #953
    Guille
    Guille
    Participant

    Hi James,

    Thanks for the huge work. We have previously (ifuproc_mod) reduced IFU data with flux variations among cubes and I am trying to re-reduce everything with the new scripts, to check for improvements.

    I did adapt the script for our IFU data (file names) and started to work on them, but faced a problem at the very beginning.

    I paste the end of the logfile when the problem is flagged, but I can send you the complete script and file if needed.

    ===============

    Aug 6 11:46: IMCOMBINE
    combine = average, scale = none, zero = none, weight = none
    reject = avsigclip, mclip = yes, nkeep = 1
    lsigma = 2., hsigma = 2.
    blank = 0.
    statsec = Aug 6 11:46
    Images Exp
    tmpfile7975ggS20110906S0200.fits[SCI,1] 0.0
    tmpfile7975ggS20110906S0201.fits[SCI,1] 0.0
    tmpfile7975ggS20110906S0203.fits[SCI,1] 0.0
    tmpfile7975ggS20110906S0204.fits[SCI,1] 0.0
    tmpfile7975ggS20110906S0205.fits[SCI,1] 0.0
    tmpfile7975ggS20110906S0206.fits[SCI,1] 0.0
    tmpfile7975ggS20110906S0207.fits[SCI,1] 0.0
    tmpfile7975ggS20110907S0354.fits[SCI,1] 0.0
    tmpfile7975ggS20110907S0355.fits[SCI,1] 0.0
    tmpfile7975ggS20110907S0356.fits[SCI,1] 0.0
    tmpfile7975ggS20110907S0357.fits[SCI,1] 0.0
    tmpfile7975ggS20110907S0358.fits[SCI,1] 0.0

    Output image = tmpcombout7975oj, ncombine = 12
    Number rejected mask = tmpcombdq7975pj.pl
    Sigma image = tmpcombsig7975qj
    ERROR – GEMCOMBINE: Could not access tmpfile7975ggS20110906S0205.fits[SCI,2]

    GEMCOMBINE — Finished: Thu Aug 6 11:46:34 ART 2015

    GEMCOMBINE — Exit status: ERROR

    =======

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